snakemake-workflows/dna-seq-benchmark

A snakemake workflow for benchmarking variant calling approaches with Genome in a Bottle (GIAB), CHM (syndip) or other custom datasets

Overview

Topics:

Latest release: v1.11.7, last update: 2025-01-23

Linting: passed

Formatting: passed

Configuration

Please follow the instructions in the template config.yaml that is copied to your deployment via snakedeploy.